WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0348.4i.1 Sequence Name  B0348.4i.1
Length (nt)  4655   Chromosome Location  V: 20819-43695
Chromosome . Primary Identifier  V Chromosome Location . Start  20819
Chromosome Location . End  43695 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0348.4i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001177 egl-8 B0348.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4i B0348.4i 3942   V: 21007-21090

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4i.1 20819 43695 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon168832   272   V: 20819-21090 Caenorhabditis elegans
Exon168859   362   V: 22495-22856 Caenorhabditis elegans
Exon168884   136   V: 23159-23294 Caenorhabditis elegans
Exon168909   84   V: 23562-23645 Caenorhabditis elegans
Exon168922   104   V: 23793-23896 Caenorhabditis elegans
Exon168947   472   V: 24788-25259 Caenorhabditis elegans
Exon168972   165   V: 25965-26129 Caenorhabditis elegans
Exon168997   187   V: 26194-26380 Caenorhabditis elegans
Exon169029   180   V: 29336-29515 Caenorhabditis elegans
Exon169046   98   V: 30200-30297 Caenorhabditis elegans
Exon169084   142   V: 35015-35156 Caenorhabditis elegans
Exon169108   738   V: 36118-36855 Caenorhabditis elegans
Exon169132   296   V: 36918-37213 Caenorhabditis elegans
Exon169156   132   V: 38138-38269 Caenorhabditis elegans
Exon169193   270   V: 40454-40723 Caenorhabditis elegans
Exon169217   116   V: 41729-41844 Caenorhabditis elegans
Exon169241   127   V: 42040-42166 Caenorhabditis elegans
Exon169265   104   V: 42214-42317 Caenorhabditis elegans
Exon169300   670   V: 43026-43695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0348.4i.1 20819 43695 1

1 Sequence

Length
4655

1 Sequence Ontology Term

Identifier Name Description
transcript