WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49C3.5.2 Sequence Name  C49C3.5.2
Length (nt)  2491   Chromosome Location  IV: 17329188-17332435
Chromosome . Primary Identifier  IV Chromosome Location . Start  17329188
Chromosome Location . End  17332435 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C3.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008195 ceh-88 C49C3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49C3.5 C49C3.5 789   IV: 17329205-17329264

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C49C3.5.2 17329188 17332435 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167871   77   IV: 17329188-17329264 Caenorhabditis elegans
Exon167874   117   IV: 17329314-17329430 Caenorhabditis elegans
Exon167876   195   IV: 17329601-17329795 Caenorhabditis elegans
Exon167878   111   IV: 17330180-17330290 Caenorhabditis elegans
Exon167880   144   IV: 17330335-17330478 Caenorhabditis elegans
Exon167882   1706   IV: 17330536-17332241 Caenorhabditis elegans
Exon167885   141   IV: 17332295-17332435 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C49C3.5.2 17329188 17332435 1

1 Sequence

Length
2491

1 Sequence Ontology Term

Identifier Name Description
transcript