WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49C3.4c.1 Sequence Name  C49C3.4c.1
Length (nt)  2760   Chromosome Location  IV: 17323851-17328633
Chromosome . Primary Identifier  IV Chromosome Location . Start  17323851
Chromosome Location . End  17328633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C3.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008194 kola-5 C49C3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49C3.4c C49C3.4c 2760   IV: 17323851-17323879

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49C3.4c.1 17323851 17328633 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167828   29   IV: 17323851-17323879 Caenorhabditis elegans
Exon167831   91   IV: 17323989-17324079 Caenorhabditis elegans
Exon167834   135   IV: 17324128-17324262 Caenorhabditis elegans
Exon167837   334   IV: 17324468-17324801 Caenorhabditis elegans
Exon167840   116   IV: 17324846-17324961 Caenorhabditis elegans
Exon167843   122   IV: 17325008-17325129 Caenorhabditis elegans
Exon167846   130   IV: 17325179-17325308 Caenorhabditis elegans
Exon167849   628   IV: 17326208-17326835 Caenorhabditis elegans
Exon167852   147   IV: 17326880-17327026 Caenorhabditis elegans
Exon167855   251   IV: 17327204-17327454 Caenorhabditis elegans
Exon167858   139   IV: 17327629-17327767 Caenorhabditis elegans
Exon167861   77   IV: 17327813-17327889 Caenorhabditis elegans
Exon167864   212   IV: 17327936-17328147 Caenorhabditis elegans
Exon167867   161   IV: 17328195-17328355 Caenorhabditis elegans
Exon167869   188   IV: 17328446-17328633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49C3.4c.1 17323851 17328633 1

1 Sequence

Length
2760

1 Sequence Ontology Term

Identifier Name Description
transcript