WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49C3.1.1 Sequence Name  C49C3.1.1
Length (nt)  2457   Chromosome Location  IV: 17312142-17315462
Chromosome . Primary Identifier  IV Chromosome Location . Start  17312142
Chromosome Location . End  17315462 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49C3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004908 snf-9 C49C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49C3.1 C49C3.1 2142   IV: 17312424-17312594

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49C3.1.1 17312142 17315462 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167790   453   IV: 17312142-17312594 Caenorhabditis elegans
Exon167791   88   IV: 17312646-17312733 Caenorhabditis elegans
Exon167792   135   IV: 17312776-17312910 Caenorhabditis elegans
Exon167793   243   IV: 17312957-17313199 Caenorhabditis elegans
Exon167794   103   IV: 17313440-17313542 Caenorhabditis elegans
Exon167795   142   IV: 17313588-17313729 Caenorhabditis elegans
Exon167796   114   IV: 17313773-17313886 Caenorhabditis elegans
Exon167797   120   IV: 17313932-17314051 Caenorhabditis elegans
Exon167798   366   IV: 17314095-17314460 Caenorhabditis elegans
Exon167799   100   IV: 17314506-17314605 Caenorhabditis elegans
Exon167800   131   IV: 17314740-17314870 Caenorhabditis elegans
Exon167801   84   IV: 17314915-17314998 Caenorhabditis elegans
Exon167802   180   IV: 17315043-17315222 Caenorhabditis elegans
Exon167803   198   IV: 17315265-17315462 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49C3.1.1 17312142 17315462 1

1 Sequence

Length
2457

1 Sequence Ontology Term

Identifier Name Description
transcript