WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F3.9.1 Sequence Name  T28F3.9.1
Length (nt)  1627   Chromosome Location  IV: 17308511-17311766
Chromosome . Primary Identifier  IV Chromosome Location . Start  17308511
Chromosome Location . End  17311766 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012135 T28F3.9 T28F3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F3.9 T28F3.9 1542   IV: 17308525-17308641

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28F3.9.1 17308511 17311766 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167777   131   IV: 17308511-17308641 Caenorhabditis elegans
Exon167778   109   IV: 17308688-17308796 Caenorhabditis elegans
Exon167782   146   IV: 17309783-17309928 Caenorhabditis elegans
Exon167783   310   IV: 17309975-17310284 Caenorhabditis elegans
Exon167784   261   IV: 17310360-17310620 Caenorhabditis elegans
Exon167785   143   IV: 17310667-17310809 Caenorhabditis elegans
Exon167786   119   IV: 17310853-17310971 Caenorhabditis elegans
Exon167787   127   IV: 17311014-17311140 Caenorhabditis elegans
Exon167788   120   IV: 17311438-17311557 Caenorhabditis elegans
Exon167789   161   IV: 17311606-17311766 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28F3.9.1 17308511 17311766 1

1 Sequence

Length
1627

1 Sequence Ontology Term

Identifier Name Description
transcript