WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F3.1a.1 Sequence Name  T28F3.1a.1
Length (nt)  2133   Chromosome Location  IV: 17281461-17284199
Chromosome . Primary Identifier  IV Chromosome Location . Start  17281461
Chromosome Location . End  17284199 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012128 nra-1 T28F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F3.1a T28F3.1a 1905   IV: 17281677-17282117

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T28F3.1a.1 17281461 17284199 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167661   657   IV: 17281461-17282117 Caenorhabditis elegans
Exon167662   343   IV: 17282174-17282516 Caenorhabditis elegans
Exon167664   239   IV: 17282564-17282802 Caenorhabditis elegans
Exon167667   112   IV: 17283004-17283115 Caenorhabditis elegans
Exon167668   42   IV: 17283235-17283276 Caenorhabditis elegans
Exon167670   267   IV: 17283326-17283592 Caenorhabditis elegans
Exon167672   153   IV: 17283638-17283790 Caenorhabditis elegans
Exon167674   237   IV: 17283835-17284071 Caenorhabditis elegans
Exon167676   83   IV: 17284117-17284199 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T28F3.1a.1 17281461 17284199 -1

1 Sequence

Length
2133

1 Sequence Ontology Term

Identifier Name Description
transcript