WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.40a.1 Sequence Name  Y116A8C.40a.1
Length (nt)  1293   Chromosome Location  IV: 17144109-17150971
Chromosome . Primary Identifier  IV Chromosome Location . Start  17144109
Chromosome Location . End  17150971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.40a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013812 str-268 Y116A8C.40 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.40a Y116A8C.40a 1047   IV: 17144355-17144470

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8C.40a.1 17144109 17150971 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167187   362   IV: 17144109-17144470 Caenorhabditis elegans
Exon167191   316   IV: 17144956-17145271 Caenorhabditis elegans
Exon167193   142   IV: 17146730-17146871 Caenorhabditis elegans
Exon167195   135   IV: 17146927-17147061 Caenorhabditis elegans
Exon167197   167   IV: 17147108-17147274 Caenorhabditis elegans
Exon167204   156   IV: 17150697-17150852 Caenorhabditis elegans
Exon167206   15   IV: 17150957-17150971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8C.40a.1 17144109 17150971 -1

1 Sequence

Length
1293

1 Sequence Ontology Term

Identifier Name Description
transcript