WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.36a.1 Sequence Name  Y116A8C.36a.1
Length (nt)  3589   Chromosome Location  IV: 17119684-17126266
Chromosome . Primary Identifier  IV Chromosome Location . Start  17119684
Chromosome Location . End  17126266 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.36a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006405 itsn-1 Y116A8C.36 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.36a Y116A8C.36a 3258   IV: 17119684-17119833

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8C.36a.1 17119684 17126266 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon167123   150   IV: 17119684-17119833 Caenorhabditis elegans
Exon167124   585   IV: 17119885-17120469 Caenorhabditis elegans
Exon167126   462   IV: 17120953-17121414 Caenorhabditis elegans
Exon167130   225   IV: 17121562-17121786 Caenorhabditis elegans
Exon167139   631   IV: 17121833-17122463 Caenorhabditis elegans
Exon167142   371   IV: 17123245-17123615 Caenorhabditis elegans
Exon167148   317   IV: 17124202-17124518 Caenorhabditis elegans
Exon167158   848   IV: 17125419-17126266 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8C.36a.1 17119684 17126266 1

1 Sequence

Length
3589

1 Sequence Ontology Term

Identifier Name Description
transcript