Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y116A8C.459 | Y116A8C.459 |
21
 |
IV: 17046413-17046433 |
Other
16 Allele
| Public Name |
|---|
| gk964078 |
| gk964500 |
| gk962765 |
| gk963590 |
| gk962529 |
| gk963948 |
| gk963888 |
| gk963667 |
| gk963681 |
| gk963831 |
| gk963362 |
| gk964119 |
| WBVar02124370 |
| WBVar02124129 |
| WBVar02124130 |
| WBVar01660732 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00174828 | 17046413 | 17046433 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_17046434..17046469 | 36 | IV: 17046434-17046469 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Temperature Shift: 25C vs 15C for 16 hours at L4 larva stage. | Transcripts that showed significantly increased expression in AFD neurons comparing to in whole animals. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00065158:AFD_enriched |
| Heat shock: 35C for 1 hour. | Transcripts that showed significantly decreased expression immediately after 1-day post L4 adult hermaphrodite N2 animals were exposed to 35C for 1 hour. | The DESeq2 (GalaxyVersion 2.11.40.6 + galaxy1) was used to determine differentiallyexpressed features from count tables of differential transcript abundances. log2FC > 1, FDR < 0.01. | WBPaper00065749:Heat-Shock_downregulated_N2 |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_17046044..17046412 | 369 | IV: 17046044-17046412 | Caenorhabditis elegans |
