WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.16c.1 Sequence Name  Y116A8C.16c.1
Length (nt)  3942   Chromosome Location  IV: 16995822-17014910
Chromosome . Primary Identifier  IV Chromosome Location . Start  16995822
Chromosome Location . End  17014910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.16c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004403 rom-4 Y116A8C.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.16c Y116A8C.16c 3618   IV: 16995822-16995863

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.16c.1 16995822 17014910 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166676   42   IV: 16995822-16995863 Caenorhabditis elegans
Exon166678   65   IV: 16995912-16995976 Caenorhabditis elegans
Exon166680   84   IV: 16996028-16996111 Caenorhabditis elegans
Exon166682   56   IV: 16996188-16996243 Caenorhabditis elegans
Exon166684   242   IV: 16996703-16996944 Caenorhabditis elegans
Exon166686   101   IV: 16998743-16998843 Caenorhabditis elegans
Exon166688   344   IV: 16999491-16999834 Caenorhabditis elegans
Exon166689   389   IV: 17002694-17003082 Caenorhabditis elegans
Exon166693   378   IV: 17004743-17005120 Caenorhabditis elegans
Exon166697   597   IV: 17008629-17009225 Caenorhabditis elegans
Exon166701   746   IV: 17010273-17011018 Caenorhabditis elegans
Exon166705   140   IV: 17012586-17012725 Caenorhabditis elegans
Exon166709   263   IV: 17012892-17013154 Caenorhabditis elegans
Exon166717   495   IV: 17014416-17014910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.16c.1 16995822 17014910 1

1 Sequence

Length
3942

1 Sequence Ontology Term

Identifier Name Description
transcript