WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.14a.1 Sequence Name  Y116A8C.14a.1
Length (nt)  2586   Chromosome Location  IV: 16965284-16970490
Chromosome . Primary Identifier  IV Chromosome Location . Start  16965284
Chromosome Location . End  16970490 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.14a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004402 rom-3 Y116A8C.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.14a Y116A8C.14a 2586   IV: 16965284-16965454

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.14a.1 16965284 16970490 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166537   171   IV: 16965284-16965454 Caenorhabditis elegans
Exon166538   260   IV: 16965648-16965907 Caenorhabditis elegans
Exon166540   146   IV: 16965971-16966116 Caenorhabditis elegans
Exon166542   686   IV: 16966341-16967026 Caenorhabditis elegans
Exon166545   618   IV: 16967079-16967696 Caenorhabditis elegans
Exon166546   114   IV: 16967771-16967884 Caenorhabditis elegans
Exon166547   148   IV: 16968013-16968160 Caenorhabditis elegans
Exon166548   74   IV: 16968731-16968804 Caenorhabditis elegans
Exon166549   152   IV: 16968857-16969008 Caenorhabditis elegans
Exon166551   56   IV: 16970114-16970169 Caenorhabditis elegans
Exon166552   72   IV: 16970212-16970283 Caenorhabditis elegans
Exon166553   65   IV: 16970350-16970414 Caenorhabditis elegans
Exon166554   24   IV: 16970467-16970490 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.14a.1 16965284 16970490 -1

1 Sequence

Length
2586

1 Sequence Ontology Term

Identifier Name Description
transcript