WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.13a.1 Sequence Name  Y116A8C.13a.1
Length (nt)  2567   Chromosome Location  IV: 16950067-16962868
Chromosome . Primary Identifier  IV Chromosome Location . Start  16950067
Chromosome Location . End  16962868 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013792 rad-54.B Y116A8C.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.13a Y116A8C.13a 2502   IV: 16950067-16950109

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8C.13a.1 16950067 16962868 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166520   43   IV: 16950067-16950109 Caenorhabditis elegans
Exon166521   151   IV: 16951385-16951535 Caenorhabditis elegans
Exon166522   229   IV: 16952501-16952729 Caenorhabditis elegans
Exon166524   349   IV: 16953816-16954164 Caenorhabditis elegans
Exon166526   302   IV: 16955058-16955359 Caenorhabditis elegans
Exon166528   232   IV: 16956958-16957189 Caenorhabditis elegans
Exon166530   398   IV: 16958068-16958465 Caenorhabditis elegans
Exon166532   228   IV: 16960658-16960885 Caenorhabditis elegans
Exon166535   635   IV: 16962234-16962868 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8C.13a.1 16950067 16962868 1

1 Sequence

Length
2567

1 Sequence Ontology Term

Identifier Name Description
transcript