WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8C.9a.1 Sequence Name  Y116A8C.9a.1
Length (nt)  2498   Chromosome Location  IV: 16939216-16946800
Chromosome . Primary Identifier  IV Chromosome Location . Start  16939216
Chromosome Location . End  16946800 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8C.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013789 Y116A8C.9 Y116A8C.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8C.9a Y116A8C.9a 1269   IV: 16940445-16940554

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.9a.1 16939216 16946800 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166499   1339   IV: 16939216-16940554 Caenorhabditis elegans
Exon166501   163   IV: 16941045-16941207 Caenorhabditis elegans
Exon166503   210   IV: 16942106-16942315 Caenorhabditis elegans
Exon166506   96   IV: 16943015-16943110 Caenorhabditis elegans
Exon166508   171   IV: 16944084-16944254 Caenorhabditis elegans
Exon166509   198   IV: 16944833-16945030 Caenorhabditis elegans
Exon166510   97   IV: 16946316-16946412 Caenorhabditis elegans
Exon166511   99   IV: 16946474-16946572 Caenorhabditis elegans
Exon166512   78   IV: 16946625-16946702 Caenorhabditis elegans
Exon166513   47   IV: 16946754-16946800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y116A8C.9a.1 16939216 16946800 -1

1 Sequence

Length
2498

1 Sequence Ontology Term

Identifier Name Description
transcript