WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y116A8A.9b.1 Sequence Name  Y116A8A.9b.1
Length (nt)  1407   Chromosome Location  IV: 16848483-16854882
Chromosome . Primary Identifier  IV Chromosome Location . Start  16848483
Chromosome Location . End  16854882 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116A8A.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003130 map-2 Y116A8A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y116A8A.9b Y116A8A.9b 1407   IV: 16848483-16848605

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8A.9b.1 16848483 16854882 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon166180   123   IV: 16848483-16848605 Caenorhabditis elegans
Exon166183   573   IV: 16850157-16850729 Caenorhabditis elegans
Exon166185   157   IV: 16851533-16851689 Caenorhabditis elegans
Exon166188   325   IV: 16852148-16852472 Caenorhabditis elegans
Exon166191   105   IV: 16853359-16853463 Caenorhabditis elegans
Exon166193   72   IV: 16853744-16853815 Caenorhabditis elegans
Exon166194   52   IV: 16854831-16854882 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y116A8A.9b.1 16848483 16854882 -1

1 Sequence

Length
1407

1 Sequence Ontology Term

Identifier Name Description
transcript