Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y116A8A.42 | Y116A8A.42 |
21
 |
IV: 16829252-16829272 |
Other
16 Allele
| Public Name |
|---|
| gk964078 |
| gk964500 |
| gk962765 |
| gk963590 |
| gk963795 |
| gk963704 |
| gk962529 |
| gk963948 |
| gk963888 |
| WBVar02122004 |
| WBVar02124126 |
| WBVar02109282 |
| WBVar01660158 |
| WBVar01583218 |
| WBVar01583217 |
| WBVar00199732 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00047968 | 16829252 | 16829272 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_16829273..16829501 | 229 | IV: 16829273-16829501 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Fungi infection: Fusarium oxysporum | Transcripts that showed significantly altered expression after infected by fungi Fusarium oxysporum from 0 t0 48 hours. | The Benjamini and Hochberg approach was used to adjust the resulting P-values for controlling the false-discovery rate. The transcripts having a false-discovery rate of < 0.05 were considered as differentially expressed. | WBPaper00053368:F.oxysporum_regulated |
| Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum | Transcripts that showed significantly increased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. | GFold3, logFC < -1 or > 1. | WBPaper00066703:L.plantarum-pdxH_upregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_16829002..16829251 | 250 | IV: 16829002-16829251 | Caenorhabditis elegans |
