WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y43D4A.5b.1 Sequence Name  Y43D4A.5b.1
Length (nt)  1872   Chromosome Location  IV: 16775847-16785057
Chromosome . Primary Identifier  IV Chromosome Location . Start  16775847
Chromosome Location . End  16785057 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43D4A.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012791 Y43D4A.5 Y43D4A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43D4A.5b Y43D4A.5b 1872   IV: 16775847-16775883

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y43D4A.5b.1 16775847 16785057 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon165833   37   IV: 16775847-16775883 Caenorhabditis elegans
Exon165836   93   IV: 16775941-16776033 Caenorhabditis elegans
Exon165841   145   IV: 16776307-16776451 Caenorhabditis elegans
Exon165847   55   IV: 16779367-16779421 Caenorhabditis elegans
Exon165852   114   IV: 16779465-16779578 Caenorhabditis elegans
Exon165856   102   IV: 16779629-16779730 Caenorhabditis elegans
Exon165860   166   IV: 16779784-16779949 Caenorhabditis elegans
Exon165865   254   IV: 16780083-16780336 Caenorhabditis elegans
Exon165869   88   IV: 16780384-16780471 Caenorhabditis elegans
Exon165873   127   IV: 16780518-16780644 Caenorhabditis elegans
Exon165877   45   IV: 16780774-16780818 Caenorhabditis elegans
Exon165879   56   IV: 16780935-16780990 Caenorhabditis elegans
Exon165889   222   IV: 16781952-16782173 Caenorhabditis elegans
Exon165894   254   IV: 16782572-16782825 Caenorhabditis elegans
Exon165904   114   IV: 16784944-16785057 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y43D4A.5b.1 16775847 16785057 1

1 Sequence

Length
1872

1 Sequence Ontology Term

Identifier Name Description
transcript