WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.25b.1 Sequence Name  Y105C5B.25b.1
Length (nt)  1164   Chromosome Location  IV: 16142920-16147142
Chromosome . Primary Identifier  IV Chromosome Location . Start  16142920
Chromosome Location . End  16147142 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.25b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013662 gtnt-48 Y105C5B.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.25b Y105C5B.25b 1164   IV: 16142920-16142947

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.25b.1 16142920 16147142 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon163479   28   IV: 16142920-16142947 Caenorhabditis elegans
Exon163485   86   IV: 16143439-16143524 Caenorhabditis elegans
Exon163487   288   IV: 16143566-16143853 Caenorhabditis elegans
Exon163493   79   IV: 16144658-16144736 Caenorhabditis elegans
Exon163496   74   IV: 16144783-16144856 Caenorhabditis elegans
Exon163501   98   IV: 16145235-16145332 Caenorhabditis elegans
Exon163506   286   IV: 16145877-16146162 Caenorhabditis elegans
Exon163511   143   IV: 16146786-16146928 Caenorhabditis elegans
Exon163513   82   IV: 16147061-16147142 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.25b.1 16142920 16147142 -1

1 Sequence

Length
1164

1 Sequence Ontology Term

Identifier Name Description
transcript