WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.21c.1 Sequence Name  Y105C5B.21c.1
Length (nt)  3546   Chromosome Location  IV: 15998129-16017489
Chromosome . Primary Identifier  IV Chromosome Location . Start  15998129
Chromosome Location . End  16017489 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.21c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002175 jac-1 Y105C5B.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.21c Y105C5B.21c 3546   IV: 15998129-15998405

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.21c.1 15998129 16017489 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon162697   277   IV: 15998129-15998405 Caenorhabditis elegans
Exon162703   169   IV: 15998926-15999094 Caenorhabditis elegans
Exon162711   159   IV: 15999150-15999308 Caenorhabditis elegans
Exon162719   1104   IV: 15999764-16000867 Caenorhabditis elegans
Exon162731   180   IV: 16001755-16001934 Caenorhabditis elegans
Exon162743   432   IV: 16002467-16002898 Caenorhabditis elegans
Exon162761   181   IV: 16004382-16004562 Caenorhabditis elegans
Exon162775   338   IV: 16005253-16005590 Caenorhabditis elegans
Exon162785   126   IV: 16005925-16006050 Caenorhabditis elegans
Exon162822   198   IV: 16011898-16012095 Caenorhabditis elegans
Exon162843   229   IV: 16014313-16014541 Caenorhabditis elegans
Exon162862   153   IV: 16017337-16017489 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.21c.1 15998129 16017489 -1

1 Sequence

Length
3546

1 Sequence Ontology Term

Identifier Name Description
transcript