WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.21g.1 Sequence Name  Y105C5B.21g.1
Length (nt)  3261   Chromosome Location  IV: 15998129-16014403
Chromosome . Primary Identifier  IV Chromosome Location . Start  15998129
Chromosome Location . End  16014403 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.21g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002175 jac-1 Y105C5B.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.21g Y105C5B.21g 3261   IV: 15998129-15998405

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.21g.1 15998129 16014403 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon162696   277   IV: 15998129-15998405 Caenorhabditis elegans
Exon162707   169   IV: 15998926-15999094 Caenorhabditis elegans
Exon162715   165   IV: 15999150-15999314 Caenorhabditis elegans
Exon162723   1104   IV: 15999764-16000867 Caenorhabditis elegans
Exon162735   180   IV: 16001755-16001934 Caenorhabditis elegans
Exon162747   432   IV: 16002467-16002898 Caenorhabditis elegans
Exon162765   181   IV: 16004382-16004562 Caenorhabditis elegans
Exon162779   338   IV: 16005253-16005590 Caenorhabditis elegans
Exon162789   126   IV: 16005925-16006050 Caenorhabditis elegans
Exon162825   198   IV: 16011898-16012095 Caenorhabditis elegans
Exon162841   91   IV: 16014313-16014403 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.21g.1 15998129 16014403 -1

1 Sequence

Length
3261

1 Sequence Ontology Term

Identifier Name Description
transcript