WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.10.1 Sequence Name  Y105C5B.10.1
Length (nt)  1014   Chromosome Location  IV: 15931822-15933914
Chromosome . Primary Identifier  IV Chromosome Location . Start  15931822
Chromosome Location . End  15933914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005727 srv-16 Y105C5B.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.10 Y105C5B.10 1014   IV: 15931822-15931960

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.10.1 15931822 15933914 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon162378   139   IV: 15931822-15931960 Caenorhabditis elegans
Exon162380   185   IV: 15932104-15932288 Caenorhabditis elegans
Exon162381   121   IV: 15932342-15932462 Caenorhabditis elegans
Exon162382   137   IV: 15932514-15932650 Caenorhabditis elegans
Exon162383   80   IV: 15932702-15932781 Caenorhabditis elegans
Exon162385   120   IV: 15932856-15932975 Caenorhabditis elegans
Exon162388   232   IV: 15933683-15933914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.10.1 15931822 15933914 -1

1 Sequence

Length
1014

1 Sequence Ontology Term

Identifier Name Description
transcript