WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105C5B.6c.1 Sequence Name  Y105C5B.6c.1
Length (nt)  1020   Chromosome Location  IV: 15906582-15910091
Chromosome . Primary Identifier  IV Chromosome Location . Start  15906582
Chromosome Location . End  15910091 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105C5B.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005726 srv-15 Y105C5B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5B.6c Y105C5B.6c 1020   IV: 15906582-15906807

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.6c.1 15906582 15910091 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon162218   226   IV: 15906582-15906807 Caenorhabditis elegans
Exon162225   120   IV: 15908125-15908244 Caenorhabditis elegans
Exon162229   80   IV: 15908934-15909013 Caenorhabditis elegans
Exon162234   159   IV: 15909111-15909269 Caenorhabditis elegans
Exon162238   117   IV: 15909316-15909432 Caenorhabditis elegans
Exon162244   79   IV: 15909482-15909560 Caenorhabditis elegans
Exon162248   100   IV: 15909629-15909728 Caenorhabditis elegans
Exon162252   139   IV: 15909953-15910091 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y105C5B.6c.1 15906582 15910091 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript