WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00045016 Gene Name  Y105C5A.30
Sequence Name  ? Y105C5A.30 Organism  Caenorhabditis elegans
Automated Description  Is affected by sir-2.1 based on microarray studies. Is affected by resveratrol based on microarray studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 414
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00045016

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

22 Allele

Public Name
gk964078
gk964500
gk962765
gk963378
gk963590
gk963377
gk963795
gk962529
gk963948
WBVar01860238
WBVar01860239
WBVar02124805
WBVar02124713
WBVar02123107
WBVar02122628
WBVar02122629
gk822909
cxTi7501
WBVar01733835
WBVar01733836
cxTi7617
WBVar01733837

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00045016 15591973 15592386 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_15591773..15591972   200 IV: 15591773-15591972 Caenorhabditis elegans

3 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes found to be regulated by low-copy overexpression of sir-2.1 with p < 0.014. N.A. WBPaper00026929:sir-2.1_overexpression_regulated
  Germline-enriched and sex-biased expression profile cluster C. hierarchical clustering [cgc6390]:Cluster_C
  Genes found to be regulated in daf-16(mgDf50) by resveratrol treatment with p < 0.01. N.A. WBPaper00026929:Resveratrol_regulated_daf-16

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00045016 15591973 15592386 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
414

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_15592387..15592495   109 IV: 15592387-15592495 Caenorhabditis elegans