WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y73F8A.21c.1 Sequence Name  Y73F8A.21c.1
Length (nt)  2379   Chromosome Location  IV: 15400277-15407416
Chromosome . Primary Identifier  IV Chromosome Location . Start  15400277
Chromosome Location . End  15407416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73F8A.21c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003604 nhr-5 Y73F8A.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73F8A.21c Y73F8A.21c 2067   IV: 15400333-15400402

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.21c.1 15400277 15407416 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon159896   126   IV: 15400277-15400402 Caenorhabditis elegans
Exon159900   62   IV: 15400451-15400512 Caenorhabditis elegans
Exon159906   139   IV: 15400970-15401108 Caenorhabditis elegans
Exon159910   63   IV: 15401332-15401394 Caenorhabditis elegans
Exon159916   173   IV: 15401828-15402000 Caenorhabditis elegans
Exon159919   246   IV: 15402065-15402310 Caenorhabditis elegans
Exon159923   149   IV: 15403163-15403311 Caenorhabditis elegans
Exon159933   274   IV: 15404061-15404334 Caenorhabditis elegans
Exon159937   222   IV: 15404818-15405039 Caenorhabditis elegans
Exon159943   111   IV: 15405324-15405434 Caenorhabditis elegans
Exon159951   48   IV: 15406393-15406440 Caenorhabditis elegans
Exon159953   148   IV: 15406483-15406630 Caenorhabditis elegans
Exon159958   618   IV: 15406799-15407416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y73F8A.21c.1 15400277 15407416 1

1 Sequence

Length
2379

1 Sequence Ontology Term

Identifier Name Description
transcript