Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y73F8A.1171 | Y73F8A.1171 |
96
 |
IV: 15311106-15311201 |
Other
12 Allele
| Public Name |
|---|
| gk964078 |
| gk964500 |
| gk962765 |
| gk963378 |
| gk963590 |
| gk963377 |
| gk963795 |
| gk963948 |
| tm11279 |
| gk963961 |
| gk961128 |
| WBVar01806652 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00201363 | 15311106 | 15311201 | 1 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Genes that showed significantly decreased mRNA expression in starved animals. mRNA samples from N2, rde-4(ne229) and hrde-4(tm1200) animals that were starved or fed for 6 days as L1s were sequenced. | A gene was considered differentially expressed if its fold-changed was greater than 1.5 and it had total reads of more than 10 RPM per comparison. | WBPaper00045486:starvation_downregulated | |
| Small RNAs (less than 200 bases long) that showed significantly increased expression in rpc-1(RNAi) animals. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00067416:rpc-1(RNAi)_upregulated_smallRNA |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_15310833..15311105 | 273 | IV: 15310833-15311105 | Caenorhabditis elegans |
