WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00006330 Gene Name  sup-24
Sequence Name  ? Y73F8A.t2 Organism  Caenorhabditis elegans
Automated Description  Expressed in several structures, including body wall musculature; hermaphrodite gonad; hypodermis; intestine; and vulva. Biotype  SO:0001272
Genetic Position  IV :13.3463 ±0.006272 Length (nt)  ? 72
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00006330

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y73F8A.t2 Y73F8A.t2 72   IV: 15289703-15289774
 

Other

0 CDSs

1 RNAi Result

WormBase ID
WBRNAi00021412

15 Allele

Public Name
gk964078
gk964500
gk962765
gk963378
gk963590
gk963377
gk963795
gk963948
gk963961
gk961128
WBVar02078840
st354
e2250
gk836453
gk378331

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00006330 15289703 15289774 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_15289775..15289900   126 IV: 15289775-15289900 Caenorhabditis elegans

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
(See also table 1)   Expr13222 sup-24 is ubiquitously expressed in all larvae stages, but loses its expression in the intestine and in most muscles during the transition to adulthood. Main visible expression: In L4: Ubiquitous expression in all tissues. In Adult: Loss of intestinal expression and weak muscle expression.  

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00006330 15289703 15289774 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
72

1 Sequence Ontology Term

Identifier Name Description
gene  

2 Strains

WormBase ID
WBStrain00004561
WBStrain00004560

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_15289506..15289702   197 IV: 15289506-15289702 Caenorhabditis elegans