WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41E3.11a.2 Sequence Name  Y41E3.11a.2
Length (nt)  5405   Chromosome Location  IV: 15040071-15049333
Chromosome . Primary Identifier  IV Chromosome Location . Start  15040071
Chromosome Location . End  15049333 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41E3.11a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012769 hrpu-1 Y41E3.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41E3.11a Y41E3.11a 5004   IV: 15040075-15040158

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.11a.2 15040071 15049333 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon158203   88   IV: 15040071-15040158 Caenorhabditis elegans
Exon158207   111   IV: 15040213-15040323 Caenorhabditis elegans
Exon158210   1114   IV: 15040374-15041487 Caenorhabditis elegans
Exon158213   386   IV: 15041540-15041925 Caenorhabditis elegans
Exon158216   165   IV: 15042436-15042600 Caenorhabditis elegans
Exon158219   985   IV: 15042659-15043643 Caenorhabditis elegans
Exon158223   562   IV: 15044165-15044726 Caenorhabditis elegans
Exon158228   1123   IV: 15045292-15046414 Caenorhabditis elegans
Exon158233   297   IV: 15047323-15047619 Caenorhabditis elegans
Exon158243   574   IV: 15048760-15049333 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41E3.11a.2 15040071 15049333 1

1 Sequence

Length
5405

1 Sequence Ontology Term

Identifier Name Description
transcript