WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00045099 Gene Name  Y67A10A.13
Sequence Name  ? Y67A10A.13 Organism  Caenorhabditis elegans
Automated Description  Is affected by clk-1 based on microarray studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 1298
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00045099

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

30 Allele

Public Name
gk964078
gk963546
gk963547
gk964500
gk962765
gk963795
gk964199
tm10631
gk963530
gk564152
gk690917
gk637428
gk845632
gk499554
gk404808
gk521824
gk931694
gk837072
gk752124
gk927733
tm11470
otn3284
gk218054
WBVar01582227
WBVar01847266
WBVar00576118
WBVar00576117
WBVar00194933
WBVar00194931
WBVar00194932

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00045099 14335194 14336491 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_14335120..14335193   74 IV: 14335120-14335193 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2. Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off. WBPaper00045774:clk-1_downregulated
  Transcripts that showed more than 4 fold of expression in CB4856 comparing to in N2 animals. DESeq2, fold change > 4. WBPaper00053909:N2_vs_CB4856_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00045099 14335194 14336491 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1298

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_14336492..14337418   927 IV: 14336492-14337418 Caenorhabditis elegans