WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0513.5a.1 Sequence Name  B0513.5a.1
Length (nt)  2093   Chromosome Location  IV: 13868556-13876615
Chromosome . Primary Identifier  IV Chromosome Location . Start  13868556
Chromosome Location . End  13876615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0513.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007197 prdh-1 B0513.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0513.5a B0513.5a 1851   IV: 13868788-13869000

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0513.5a.1 13868556 13876615 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152090   445   IV: 13868556-13869000 Caenorhabditis elegans
Exon152098   201   IV: 13870025-13870225 Caenorhabditis elegans
Exon152101   205   IV: 13870353-13870557 Caenorhabditis elegans
Exon152105   341   IV: 13870856-13871196 Caenorhabditis elegans
Exon152113   256   IV: 13871833-13872088 Caenorhabditis elegans
Exon152117   104   IV: 13872926-13873029 Caenorhabditis elegans
Exon152124   324   IV: 13873958-13874281 Caenorhabditis elegans
Exon152128   152   IV: 13874725-13874876 Caenorhabditis elegans
Exon152131   65   IV: 13876551-13876615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0513.5a.1 13868556 13876615 -1

1 Sequence

Length
2093

1 Sequence Ontology Term

Identifier Name Description
transcript