WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H08M01.2d.1 Sequence Name  H08M01.2d.1
Length (nt)  675   Chromosome Location  IV: 13842135-13844909
Chromosome . Primary Identifier  IV Chromosome Location . Start  13842135
Chromosome Location . End  13844909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H08M01.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010374 rga-5 H08M01.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H08M01.2d H08M01.2d 675   IV: 13842135-13842161

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H08M01.2d.1 13842135 13844909 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon152008   27   IV: 13842135-13842161 Caenorhabditis elegans
Exon152011   144   IV: 13842369-13842512 Caenorhabditis elegans
Exon152015   87   IV: 13842637-13842723 Caenorhabditis elegans
Exon152021   150   IV: 13843175-13843324 Caenorhabditis elegans
Exon152027   158   IV: 13844509-13844666 Caenorhabditis elegans
Exon152030   109   IV: 13844801-13844909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H08M01.2d.1 13842135 13844909 1

1 Sequence

Length
675

1 Sequence Ontology Term

Identifier Name Description
transcript