WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H08M01.2c.1 Sequence Name  H08M01.2c.1
Length (nt)  1602   Chromosome Location  IV: 13839411-13844909
Chromosome . Primary Identifier  IV Chromosome Location . Start  13839411
Chromosome Location . End  13844909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H08M01.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010374 rga-5 H08M01.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H08M01.2c H08M01.2c 1602   IV: 13839411-13839481

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H08M01.2c.1 13839411 13844909 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon151981   71   IV: 13839411-13839481 Caenorhabditis elegans
Exon151984   62   IV: 13839579-13839640 Caenorhabditis elegans
Exon151989   58   IV: 13839906-13839963 Caenorhabditis elegans
Exon151992   127   IV: 13840117-13840243 Caenorhabditis elegans
Exon151997   130   IV: 13840480-13840609 Caenorhabditis elegans
Exon152000   414   IV: 13841100-13841513 Caenorhabditis elegans
Exon152007   92   IV: 13842070-13842161 Caenorhabditis elegans
Exon152010   144   IV: 13842369-13842512 Caenorhabditis elegans
Exon152014   87   IV: 13842637-13842723 Caenorhabditis elegans
Exon152020   150   IV: 13843175-13843324 Caenorhabditis elegans
Exon152026   158   IV: 13844509-13844666 Caenorhabditis elegans
Exon152029   109   IV: 13844801-13844909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H08M01.2c.1 13839411 13844909 1

1 Sequence

Length
1602

1 Sequence Ontology Term

Identifier Name Description
transcript