WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H08M01.2b.1 Sequence Name  H08M01.2b.1
Length (nt)  4123   Chromosome Location  IV: 13827886-13844991
Chromosome . Primary Identifier  IV Chromosome Location . Start  13827886
Chromosome Location . End  13844991 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H08M01.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010374 rga-5 H08M01.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H08M01.2b H08M01.2b 4026   IV: 13827901-13828089

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H08M01.2b.1 13827886 13844991 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon151917   204   IV: 13827886-13828089 Caenorhabditis elegans
Exon151922   121   IV: 13828465-13828585 Caenorhabditis elegans
Exon151924   119   IV: 13828997-13829115 Caenorhabditis elegans
Exon151930   431   IV: 13829743-13830173 Caenorhabditis elegans
Exon151934   201   IV: 13830724-13830924 Caenorhabditis elegans
Exon151941   140   IV: 13831695-13831834 Caenorhabditis elegans
Exon151943   116   IV: 13831962-13832077 Caenorhabditis elegans
Exon151948   609   IV: 13832984-13833592 Caenorhabditis elegans
Exon151968   384   IV: 13836988-13837371 Caenorhabditis elegans
Exon151980   185   IV: 13839297-13839481 Caenorhabditis elegans
Exon151983   62   IV: 13839579-13839640 Caenorhabditis elegans
Exon151988   58   IV: 13839906-13839963 Caenorhabditis elegans
Exon151991   127   IV: 13840117-13840243 Caenorhabditis elegans
Exon151996   130   IV: 13840480-13840609 Caenorhabditis elegans
Exon151999   414   IV: 13841100-13841513 Caenorhabditis elegans
Exon152006   92   IV: 13842070-13842161 Caenorhabditis elegans
Exon152009   144   IV: 13842369-13842512 Caenorhabditis elegans
Exon152013   87   IV: 13842637-13842723 Caenorhabditis elegans
Exon152019   150   IV: 13843175-13843324 Caenorhabditis elegans
Exon152025   158   IV: 13844509-13844666 Caenorhabditis elegans
Exon152031   191   IV: 13844801-13844991 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H08M01.2b.1 13827886 13844991 1

1 Sequence

Length
4123

1 Sequence Ontology Term

Identifier Name Description
transcript