Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:T23G4.93 | T23G4.93 |
21
 |
IV: 13678056-13678076 |
Other
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00170684 | 13678056 | 13678076 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_13678077..13678163 | 87 | IV: 13678077-13678163 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology. | DESEQ2, fold change > 2 and FDR < 0.01. | WBPaper00062103:neuron_enriched | |
| Transcipts that showed significantly increased expression in young adult octr-1(ok371) comparing to in N2 at 20C. | DESeq2 v1.31.16, fold change > 2, FDR < 0.05 | WBPaper00068082:octr-1(ok371)_upregulated_YA_20C | |
| Transcripts that showed significantly decreased expression in nfki-1(cer1) animals at L1 larva stage, comparing to in N2 animals. | Differentially expressed genes between wild type and knockouts were explored using DESeq2 R package (v.1.20.0) considering a threshold of adjusted p value < 0.01. | WBPaper00060445:nfki-1(cer1)_downregulated_L1 |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_13677887..13678055 | 169 | IV: 13677887-13678055 | Caenorhabditis elegans |
