WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52G2.1a.1 Sequence Name  F52G2.1a.1
Length (nt)  2593   Chromosome Location  IV: 13513369-13521870
Chromosome . Primary Identifier  IV Chromosome Location . Start  13513369
Chromosome Location . End  13521870 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52G2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003582 dcap-2 F52G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52G2.1a F52G2.1a 2313   IV: 13513619-13513714

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F52G2.1a.1 13513369 13521870 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150683   346   IV: 13513369-13513714 Caenorhabditis elegans
Exon150686   689   IV: 13514520-13515208 Caenorhabditis elegans
Exon150690   560   IV: 13516572-13517131 Caenorhabditis elegans
Exon150694   332   IV: 13518255-13518586 Caenorhabditis elegans
Exon150699   177   IV: 13518635-13518811 Caenorhabditis elegans
Exon150703   432   IV: 13520283-13520714 Caenorhabditis elegans
Exon150705   57   IV: 13521814-13521870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F52G2.1a.1 13513369 13521870 -1

1 Sequence

Length
2593

1 Sequence Ontology Term

Identifier Name Description
transcript