WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48D1.5c.1 Sequence Name  C48D1.5c.1
Length (nt)  882   Chromosome Location  IV: 13221957-13232974
Chromosome . Primary Identifier  IV Chromosome Location . Start  13221957
Chromosome Location . End  13232974 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008178 C48D1.5 C48D1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D1.5c C48D1.5c 861   IV: 13221978-13222063

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.5c.1 13221957 13232974 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149875   107   IV: 13221957-13222063 Caenorhabditis elegans
Exon149878   226   IV: 13222406-13222631 Caenorhabditis elegans
Exon149884   162   IV: 13222689-13222850 Caenorhabditis elegans
Exon149890   78   IV: 13223269-13223346 Caenorhabditis elegans
Exon149896   123   IV: 13228283-13228405 Caenorhabditis elegans
Exon149915   186   IV: 13232789-13232974 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.5c.1 13221957 13232974 1

1 Sequence

Length
882

1 Sequence Ontology Term

Identifier Name Description
transcript