WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48D1.9a.1 Sequence Name  C48D1.9a.1
Length (nt)  775   Chromosome Location  IV: 13207392-13209666
Chromosome . Primary Identifier  IV Chromosome Location . Start  13207392
Chromosome Location . End  13209666 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194643 C48D1.9 C48D1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D1.9a C48D1.9a 699   IV: 13207468-13207476

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.9a.1 13207392 13209666 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149849   85   IV: 13207392-13207476 Caenorhabditis elegans
Exon149852   114   IV: 13208037-13208150 Caenorhabditis elegans
Exon149856   84   IV: 13208195-13208278 Caenorhabditis elegans
Exon149859   331   IV: 13208659-13208989 Caenorhabditis elegans
Exon149860   71   IV: 13209164-13209234 Caenorhabditis elegans
Exon149861   83   IV: 13209282-13209364 Caenorhabditis elegans
Exon149862   7   IV: 13209660-13209666 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.9a.1 13207392 13209666 -1

1 Sequence

Length
775

1 Sequence Ontology Term

Identifier Name Description
transcript