WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48D1.1a.1 Sequence Name  C48D1.1a.1
Length (nt)  2134   Chromosome Location  IV: 13193563-13197382
Chromosome . Primary Identifier  IV Chromosome Location . Start  13193563
Chromosome Location . End  13197382 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008177 C48D1.1 C48D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D1.1a C48D1.1a 1899   IV: 13193798-13193963

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.1a.1 13193563 13197382 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149817   401   IV: 13193563-13193963 Caenorhabditis elegans
Exon149819   603   IV: 13194292-13194894 Caenorhabditis elegans
Exon149821   274   IV: 13195226-13195499 Caenorhabditis elegans
Exon149823   164   IV: 13195545-13195708 Caenorhabditis elegans
Exon149825   266   IV: 13195825-13196090 Caenorhabditis elegans
Exon149828   125   IV: 13196558-13196682 Caenorhabditis elegans
Exon149829   243   IV: 13197032-13197274 Caenorhabditis elegans
Exon149830   58   IV: 13197325-13197382 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.1a.1 13193563 13197382 -1

1 Sequence

Length
2134

1 Sequence Ontology Term

Identifier Name Description
transcript