WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00172590 Gene Name  21ur-15089
Sequence Name  ? F09E8.10 Organism  Caenorhabditis elegans
Biotype  SO:0001638 Genetic Position  IV :8.29279 ±0.028759
Length (nt)  ? 21
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00172590

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F09E8.10 F09E8.10 21   IV: 13168027-13168047
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk964278
gk964078
gk963546
gk963547
gk964500
gk962765
gk215946

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00172590 13168027 13168047 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_13167963..13168026   64 IV: 13167963-13168026 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria diet: enterotoxigenic Escherichia coli (ETEC). Transcripts that showed significantly inreased expression after young adult N2 animals were cultured with enterotoxigenic Escherichia coli (ETEC) for five days. DESeq2, log2FC > 2 and p-value < 0.05. WBPaper00066289:Enterotoxigenic-E.coli_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00172590 13168027 13168047 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
21

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrIV_13168048..13170540   2493 IV: 13168048-13170540 Caenorhabditis elegans