WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E8.3a.1 Sequence Name  F09E8.3a.1
Length (nt)  4216   Chromosome Location  IV: 13155233-13164054
Chromosome . Primary Identifier  IV Chromosome Location . Start  13155233
Chromosome Location . End  13164054 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003421 msh-5 F09E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E8.3a F09E8.3a 4110   IV: 13155233-13155386

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F09E8.3a.1 13155233 13164054 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149735   154   IV: 13155233-13155386 Caenorhabditis elegans
Exon149736   159   IV: 13155438-13155596 Caenorhabditis elegans
Exon149737   81   IV: 13155644-13155724 Caenorhabditis elegans
Exon149738   198   IV: 13155781-13155978 Caenorhabditis elegans
Exon149739   119   IV: 13156028-13156146 Caenorhabditis elegans
Exon149740   110   IV: 13156193-13156302 Caenorhabditis elegans
Exon149741   226   IV: 13156370-13156595 Caenorhabditis elegans
Exon149742   63   IV: 13157365-13157427 Caenorhabditis elegans
Exon149743   111   IV: 13157478-13157588 Caenorhabditis elegans
Exon149744   75   IV: 13157647-13157721 Caenorhabditis elegans
Exon149745   73   IV: 13157996-13158068 Caenorhabditis elegans
Exon149747   166   IV: 13158116-13158281 Caenorhabditis elegans
Exon149749   787   IV: 13158767-13159553 Caenorhabditis elegans
Exon149751   242   IV: 13159629-13159870 Caenorhabditis elegans
Exon149753   162   IV: 13160421-13160582 Caenorhabditis elegans
Exon149755   255   IV: 13160629-13160883 Caenorhabditis elegans
Exon149757   210   IV: 13161658-13161867 Caenorhabditis elegans
Exon149759   108   IV: 13161915-13162022 Caenorhabditis elegans
Exon149761   489   IV: 13162750-13163238 Caenorhabditis elegans
Exon149764   428   IV: 13163627-13164054 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F09E8.3a.1 13155233 13164054 1

1 Sequence

Length
4216

1 Sequence Ontology Term

Identifier Name Description
transcript