WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55D9A.1d.1 Sequence Name  Y55D9A.1d.1
Length (nt)  1905   Chromosome Location  IV: 12606104-12611938
Chromosome . Primary Identifier  IV Chromosome Location . Start  12606104
Chromosome Location . End  12611938 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55D9A.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013223 efa-6 Y55D9A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55D9A.1d Y55D9A.1d 1905   IV: 12606104-12606289

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55D9A.1d.1 12606104 12611938 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147905   186   IV: 12606104-12606289 Caenorhabditis elegans
Exon147909   506   IV: 12606959-12607464 Caenorhabditis elegans
Exon147913   533   IV: 12609868-12610400 Caenorhabditis elegans
Exon147917   184   IV: 12610454-12610637 Caenorhabditis elegans
Exon147921   235   IV: 12610756-12610990 Caenorhabditis elegans
Exon147925   122   IV: 12611295-12611416 Caenorhabditis elegans
Exon147926   139   IV: 12611800-12611938 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55D9A.1d.1 12606104 12611938 -1

1 Sequence

Length
1905

1 Sequence Ontology Term

Identifier Name Description
transcript