WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B2.6.1 Sequence Name  F53B2.6.1
Length (nt)  1685   Chromosome Location  IV: 12542183-12545737
Chromosome . Primary Identifier  IV Chromosome Location . Start  12542183
Chromosome Location . End  12545737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B2.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001820 ham-1 F53B2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B2.6 F53B2.6 1245   IV: 12542216-12542316

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53B2.6.1 12542183 12545737 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147706   134   IV: 12542183-12542316 Caenorhabditis elegans
Exon147707   158   IV: 12542394-12542551 Caenorhabditis elegans
Exon147708   173   IV: 12542871-12543043 Caenorhabditis elegans
Exon147709   380   IV: 12543447-12543826 Caenorhabditis elegans
Exon147710   840   IV: 12544898-12545737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53B2.6.1 12542183 12545737 1

1 Sequence

Length
1685

1 Sequence Ontology Term

Identifier Name Description
transcript