WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B2.2.1 Sequence Name  F53B2.2.1
Length (nt)  797   Chromosome Location  IV: 12519119-12520250
Chromosome . Primary Identifier  IV Chromosome Location . Start  12519119
Chromosome Location . End  12520250 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006630 tsp-4 F53B2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B2.2 F53B2.2 726   IV: 12519171-12519434

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53B2.2.1 12519119 12520250 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147675   316   IV: 12519119-12519434 Caenorhabditis elegans
Exon147676   99   IV: 12519522-12519620 Caenorhabditis elegans
Exon147677   183   IV: 12519778-12519960 Caenorhabditis elegans
Exon147678   114   IV: 12520007-12520120 Caenorhabditis elegans
Exon147679   85   IV: 12520166-12520250 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53B2.2.1 12519119 12520250 -1

1 Sequence

Length
797

1 Sequence Ontology Term

Identifier Name Description
transcript