WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08G5.6.1 Sequence Name  F08G5.6.1
Length (nt)  1102   Chromosome Location  IV: 12435833-12438236
Chromosome . Primary Identifier  IV Chromosome Location . Start  12435833
Chromosome Location . End  12438236 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08G5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008584 irg-4 F08G5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08G5.6 F08G5.6 1038   IV: 12435851-12435902

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08G5.6.1 12435833 12438236 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147474   70   IV: 12435833-12435902 Caenorhabditis elegans
Exon147475   110   IV: 12435947-12436056 Caenorhabditis elegans
Exon147476   113   IV: 12436110-12436222 Caenorhabditis elegans
Exon147477   119   IV: 12436268-12436386 Caenorhabditis elegans
Exon147478   113   IV: 12436435-12436547 Caenorhabditis elegans
Exon147479   360   IV: 12436934-12437293 Caenorhabditis elegans
Exon147480   217   IV: 12438020-12438236 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08G5.6.1 12435833 12438236 1

1 Sequence

Length
1102

1 Sequence Ontology Term

Identifier Name Description
transcript