WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28D1.10.1 Sequence Name  F28D1.10.1
Length (nt)  3680   Chromosome Location  IV: 12404431-12408690
Chromosome . Primary Identifier  IV Chromosome Location . Start  12404431
Chromosome Location . End  12408690 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D1.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001580 gex-3 F28D1.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D1.10 F28D1.10 3426   IV: 12404435-12404546

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28D1.10.1 12404431 12408690 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147360   116   IV: 12404431-12404546 Caenorhabditis elegans
Exon147361   101   IV: 12404597-12404697 Caenorhabditis elegans
Exon147362   150   IV: 12404744-12404893 Caenorhabditis elegans
Exon147363   372   IV: 12404964-12405335 Caenorhabditis elegans
Exon147364   49   IV: 12405385-12405433 Caenorhabditis elegans
Exon147365   214   IV: 12405490-12405703 Caenorhabditis elegans
Exon147366   310   IV: 12405756-12406065 Caenorhabditis elegans
Exon147367   742   IV: 12406116-12406857 Caenorhabditis elegans
Exon147368   225   IV: 12406916-12407140 Caenorhabditis elegans
Exon147369   822   IV: 12407192-12408013 Caenorhabditis elegans
Exon147370   113   IV: 12408063-12408175 Caenorhabditis elegans
Exon147371   466   IV: 12408225-12408690 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28D1.10.1 12404431 12408690 1

1 Sequence

Length
3680

1 Sequence Ontology Term

Identifier Name Description
transcript