WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28D1.9.1 Sequence Name  F28D1.9.1
Length (nt)  2479   Chromosome Location  IV: 12392121-12398706
Chromosome . Primary Identifier  IV Chromosome Location . Start  12392121
Chromosome Location . End  12398706 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009218 acs-20 F28D1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D1.9 F28D1.9 2055   IV: 12392481-12392635

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28D1.9.1 12392121 12398706 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147346   515   IV: 12392121-12392635 Caenorhabditis elegans
Exon147347   615   IV: 12393530-12394144 Caenorhabditis elegans
Exon147348   117   IV: 12394336-12394452 Caenorhabditis elegans
Exon147349   345   IV: 12394509-12394853 Caenorhabditis elegans
Exon147350   162   IV: 12394902-12395063 Caenorhabditis elegans
Exon147351   199   IV: 12395114-12395312 Caenorhabditis elegans
Exon147352   100   IV: 12395582-12395681 Caenorhabditis elegans
Exon147353   96   IV: 12395726-12395821 Caenorhabditis elegans
Exon147354   177   IV: 12396602-12396778 Caenorhabditis elegans
Exon147355   153   IV: 12398554-12398706 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28D1.9.1 12392121 12398706 -1

1 Sequence

Length
2479

1 Sequence Ontology Term

Identifier Name Description
transcript