WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28D1.8.1 Sequence Name  F28D1.8.1
Length (nt)  1510   Chromosome Location  IV: 12387689-12390095
Chromosome . Primary Identifier  IV Chromosome Location . Start  12387689
Chromosome Location . End  12390095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28D1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009217 spe-45 F28D1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28D1.8 F28D1.8 1479   IV: 12387720-12388158

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F28D1.8.1 12387689 12390095 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147329   470   IV: 12387689-12388158 Caenorhabditis elegans
Exon147330   158   IV: 12388330-12388487 Caenorhabditis elegans
Exon147331   177   IV: 12388539-12388715 Caenorhabditis elegans
Exon147332   98   IV: 12389219-12389316 Caenorhabditis elegans
Exon147333   222   IV: 12389360-12389581 Caenorhabditis elegans
Exon147334   122   IV: 12389624-12389745 Caenorhabditis elegans
Exon147335   152   IV: 12389792-12389943 Caenorhabditis elegans
Exon147336   111   IV: 12389985-12390095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F28D1.8.1 12387689 12390095 -1

1 Sequence

Length
1510

1 Sequence Ontology Term

Identifier Name Description
transcript