WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC518.1f.1 Sequence Name  ZC518.1f.1
Length (nt)  1780   Chromosome Location  IV: 12349940-12355724
Chromosome . Primary Identifier  IV Chromosome Location . Start  12349940
Chromosome Location . End  12355724 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC518.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013921 best-22 ZC518.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC518.1f ZC518.1f 1491   IV: 12349998-12350087

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC518.1f.1 12349940 12355724 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147177   148   IV: 12349940-12350087 Caenorhabditis elegans
Exon147187   89   IV: 12350655-12350743 Caenorhabditis elegans
Exon147193   138   IV: 12350790-12350927 Caenorhabditis elegans
Exon147199   400   IV: 12351261-12351660 Caenorhabditis elegans
Exon147205   84   IV: 12351714-12351797 Caenorhabditis elegans
Exon147211   144   IV: 12352168-12352311 Caenorhabditis elegans
Exon147221   152   IV: 12353144-12353295 Caenorhabditis elegans
Exon147227   76   IV: 12353343-12353418 Caenorhabditis elegans
Exon147233   119   IV: 12353686-12353804 Caenorhabditis elegans
Exon147236   33   IV: 12353897-12353929 Caenorhabditis elegans
Exon147242   62   IV: 12354096-12354157 Caenorhabditis elegans
Exon147250   335   IV: 12355390-12355724 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC518.1f.1 12349940 12355724 1

1 Sequence

Length
1780

1 Sequence Ontology Term

Identifier Name Description
transcript