WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42C1.7a.1 Sequence Name  C42C1.7a.1
Length (nt)  2226   Chromosome Location  IV: 12293233-12301261
Chromosome . Primary Identifier  IV Chromosome Location . Start  12293233
Chromosome Location . End  12301261 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016585 oac-59 C42C1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42C1.7a C42C1.7a 2097   IV: 12293358-12293603

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C42C1.7a.1 12293233 12301261 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147059   371   IV: 12293233-12293603 Caenorhabditis elegans
Exon147061   211   IV: 12297822-12298032 Caenorhabditis elegans
Exon147062   112   IV: 12298082-12298193 Caenorhabditis elegans
Exon147063   121   IV: 12298650-12298770 Caenorhabditis elegans
Exon147064   107   IV: 12298815-12298921 Caenorhabditis elegans
Exon147065   164   IV: 12298968-12299131 Caenorhabditis elegans
Exon147066   64   IV: 12299179-12299242 Caenorhabditis elegans
Exon147067   167   IV: 12299809-12299975 Caenorhabditis elegans
Exon147068   373   IV: 12300054-12300426 Caenorhabditis elegans
Exon147069   404   IV: 12300517-12300920 Caenorhabditis elegans
Exon147070   132   IV: 12301130-12301261 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C42C1.7a.1 12293233 12301261 -1

1 Sequence

Length
2226

1 Sequence Ontology Term

Identifier Name Description
transcript