WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42C1.9a.1 Sequence Name  C42C1.9a.1
Length (nt)  809   Chromosome Location  IV: 12289449-12290994
Chromosome . Primary Identifier  IV Chromosome Location . Start  12289449
Chromosome Location . End  12290994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016587 C42C1.9 C42C1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42C1.9a C42C1.9a 759   IV: 12289467-12289548

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.9a.1 12289449 12290994 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147044   100   IV: 12289449-12289548 Caenorhabditis elegans
Exon147045   88   IV: 12289738-12289825 Caenorhabditis elegans
Exon147046   76   IV: 12289869-12289944 Caenorhabditis elegans
Exon147047   115   IV: 12289990-12290104 Caenorhabditis elegans
Exon147048   148   IV: 12290166-12290313 Caenorhabditis elegans
Exon147049   282   IV: 12290713-12290994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.9a.1 12289449 12290994 1

1 Sequence

Length
809

1 Sequence Ontology Term

Identifier Name Description
transcript