WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42C1.11a.1 Sequence Name  C42C1.11a.1
Length (nt)  1936   Chromosome Location  IV: 12279660-12281737
Chromosome . Primary Identifier  IV Chromosome Location . Start  12279660
Chromosome Location . End  12281737 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016589 ltah-1.1 C42C1.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42C1.11a C42C1.11a 1830   IV: 12279663-12279713

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.11a.1 12279660 12281737 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon147004   54   IV: 12279660-12279713 Caenorhabditis elegans
Exon147007   339   IV: 12279758-12280096 Caenorhabditis elegans
Exon147011   1328   IV: 12280146-12281473 Caenorhabditis elegans
Exon147015   215   IV: 12281523-12281737 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.11a.1 12279660 12281737 1

1 Sequence

Length
1936

1 Sequence Ontology Term

Identifier Name Description
transcript