WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C42C1.5.2 Sequence Name  C42C1.5.2
Length (nt)  1478   Chromosome Location  IV: 12276083-12278059
Chromosome . Primary Identifier  IV Chromosome Location . Start  12276083
Chromosome Location . End  12278059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C42C1.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016583 tag-335 C42C1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C42C1.5 C42C1.5 1098   IV: 12276435-12276527

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.5.2 12276083 12278059 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon146987   445   IV: 12276083-12276527 Caenorhabditis elegans
Exon146990   105   IV: 12276585-12276689 Caenorhabditis elegans
Exon146992   119   IV: 12277084-12277202 Caenorhabditis elegans
Exon146994   809   IV: 12277251-12278059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C42C1.5.2 12276083 12278059 -1

1 Sequence

Length
1478

1 Sequence Ontology Term

Identifier Name Description
transcript